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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011027.1_659_858_R

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

659 - 858

Intron Length:

200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

GCTGCCATCTCAG|A

3'SS Class:

minor_BPS

U2 Branch Point Sequence:

TGTTTAA

U12 Branch Point Sequence:

ATCCCCTTCACT

Flanking Amino Acid:

LNLDFSTAYRKITELKTLKG

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.2

0.03

1.2

56.4

43.4

Major BPS

72.1

0.55

1.1

63.7

43.9

Major PPT

0.38

0.9

62.3

38.5

Minor 5ss

97.5

1.6

0.6

95.7

13.5

Minor BPS

65.2

0.56

1.8

79.83

Associated Gene:

Gene:

RFC5

Ensembl Gene ID:

ENSAPLG00000003227

Chromosome:

PEDO01011027.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003303

21 - 1662

1642