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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011027.1_989_1080_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

989 - 1080

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCGAG

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTTCCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTCCAC

U12 Branch Point Sequence:

CCTTCCTCCACC

Flanking Amino Acid:

DMRRALNILQSTAMAFGKVT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

72.3

39.5

Major BPS

-0.1

1.3

55.7

39.5

Major PPT

81.4

0.71

0.7

80.1

25.3

Minor 5ss

35.7

-1.6

3.3

45.9

49.3

Minor BPS

54.3

0.12

66.23

45.6

Associated Gene:

Gene:

RFC5

Ensembl Gene ID:

ENSAPLG00000003227

Chromosome:

PEDO01011027.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003303

21 - 1662

1642