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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011036.1_187_227_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

187 - 227

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-GG

5'SS Sequence:

GTG|GTGGGCAAG

5'SS Class:

major

3'SS Sequence:

CGGGGGGCGGCGG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGGCAA

U12 Branch Point Sequence:

GCCCCCGCGGCG

Flanking Amino Acid:

NELLSDVHFVGGSSRARPAA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.5

0.41

1.1

57.6

Major BPS

44.3

-0.3

1.5

49.1

46.3

Major PPT

29.5

-1.1

26.8

37.3

Minor 5ss

-2.1

3.1

35.4

42.6

Minor BPS

26.4

-2

3.5

32.59

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025877

Chromosome:

PEDO01011036.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032422

21 - 1374

1354