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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011040.1_540_1245_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

540 - 1245

Intron Length:

706

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGCGGTGC

5'SS Class:

major

3'SS Sequence:

CTGAAGGGATTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATCTGAA

U12 Branch Point Sequence:

ATATGCTGAGCA

Flanking Amino Acid:

RKQELLADIQGVMLLTSESL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

61.1

40.6

Major BPS

73.3

0.58

0.9

63.4

35.6

Major PPT

47.3

-0.1

1.1

39.9

43.4

Minor 5ss

30.6

-2.2

3.4

41.2

45.5

Minor BPS

48.1

-0.1

2.1

63.96

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027033

Chromosome:

PEDO01011040.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034150

393 - 1293

901