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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011099.1_230_1072_R

Intron Information:

Intron Rank:

132026

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

230 - 1072

Intron Length:

843

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

GGGGCGGTTTTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTTTTAC

U12 Branch Point Sequence:

TTTTACTGGAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.4

29.1

Major BPS

68.8

0.47

1.2

63.4

Major PPT

52.8

0.06

1.1

46.6

45.9

Minor 5ss

28.5

-2.5

35.5

41.2

Minor BPS

51.8

0.04

71.74

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000018271

Chromosome:

PEDO01011099.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040804

21 - 2061

2041