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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011164.1_1637_1745_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
1637 - 1745

Intron Length:
109

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCT|GTAAGCGCA

5'SS Class:
major

3'SS Sequence:
GCCCCCTCCCTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GGTTTAT

U12 Branch Point Sequence:
GGTGGTTTATTT

Flanking Amino Acid:
LELLGQQLAQLCGDPLAGSP

Intron Amino Acid Position:
238

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.6
0.41
1.2
59.3
39.9

Major BPS
63.5
0.34
1.4
57.4
49.1

Major PPT
62.7
0.29
0.8
53.7
31

Minor 5ss
39.5
-1.2
3.4
57.8
46.4

Minor BPS
45.1
-0.3
2
60.61
43.8

Associated Gene:

Gene:
GTPBP3

Ensembl Gene ID:

Chromosome:
PEDO01011164.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 2101
2081