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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011168.1_2391_3436_R

Intron Information:

Intron Rank:

144579

Intron Class:

major

Intron Phase:

Intron Coordinates:

2391 - 3436

Intron Length:

1046

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTGCC

5'SS Class:

major

3'SS Sequence:

TTCTTCCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTGTGAA

U12 Branch Point Sequence:

ACCACCCTGACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

1.1

67.9

38.9

Major BPS

59.7

0.24

1.2

52.7

43.2

Major PPT

86.5

0.82

0.7

81.4

23.6

Minor 5ss

36.9

-1.5

3.3

42.2

Minor BPS

51.8

0.14

1.8

67.07

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025110

Chromosome:

PEDO01011168.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041198

1330 - 3861

2532