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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011179.1_146097_146987_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

146097 - 146987

Intron Length:

891

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGTT

5'SS Class:

strong_major

3'SS Sequence:

TTGGTTGCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTCAC

U12 Branch Point Sequence:

GCTCTGGGAACT

Flanking Amino Acid:

PSENAGVMCSGFVRLVGGDS

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.1

0.99

0.8

30.3

Major BPS

68.4

0.46

0.9

69.3

26.9

Major PPT

74.8

0.56

65.9

45.3

Minor 5ss

35.2

-1.7

3.8

49.2

Minor BPS

39.1

-0.7

2.5

58.31

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029751

Chromosome:

PEDO01011179.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042963

142343 - 147498

5156