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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011179.1_23709_24354_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

23709 - 24354

Intron Length:

646

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTCCCCATG

5'SS Class:

weak_major

3'SS Sequence:

TCTCTGTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAACAAA

U12 Branch Point Sequence:

TCTCTGTCAACA

Flanking Amino Acid:

IATNSQEAAARHEAERLAQE

Intron Amino Acid Position:

768

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

52.5

0.06

1.5

54.7

49.5

Major BPS

49.3

-0

1.3

57.4

35.7

Major PPT

0.54

0.9

69.3

35.7

Minor 5ss

42.9

-0.8

46.2

Minor BPS

-0.1

2.2

64.43

42.1

Associated Gene:

Gene:

MVP

Ensembl Gene ID:

ENSAPLG00000010706

Chromosome:

PEDO01011179.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011147

9375 - 25831

16457

ENSAPLT00000043539

9375 - 25665

16291