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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011179.1_61818_66432_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

61818 - 66432

Intron Length:

4615

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAAAAGG

5'SS Class:

major

3'SS Sequence:

ACGGGACCTTCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CAGTAAC

U12 Branch Point Sequence:

ACAGCAGTAACG

Flanking Amino Acid:

HPSLVLTSKGNINTGGLSLA

Intron Amino Acid Position:

102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.9

0.38

58.6

40.4

Major BPS

54.4

0.11

1.2

36.4

Major PPT

58.9

0.2

51.9

42.4

Minor 5ss

28.5

-2.5

2.9

31.2

36.4

Minor BPS

42.9

-0.6

2.3

47.5

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026622

Chromosome:

PEDO01011179.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038954

61442 - 66737

5296