Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011179.1_64194_64317_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64194 - 64317

Intron Length:

124

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGGGTGAG

5'SS Class:

major

3'SS Sequence:

AAAACACTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACATAT

U12 Branch Point Sequence:

TGTCCATTGACA

Flanking Amino Acid:

LGGTVAKMMAWIQIAHVVDG

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

61.1

39.6

Major BPS

57.6

0.19

33.7

Major PPT

62.8

0.29

56.3

43.5

Minor 5ss

25.3

-2.8

3.2

26.8

38.4

Minor BPS

0.43

1.6

74.64

35.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022242

Chromosome:

PEDO01011179.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031730

63782 - 68702

4921