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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011189.1_976_1204_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

976 - 1204

Intron Length:

229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGGGGG

5'SS Class:

major

3'SS Sequence:

TCACCCCGTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

TGCACCCCAACC

Flanking Amino Acid:

TVNLINANCSAEKAQLRSQL

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.1

0.69

60.5

44.3

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

0.41

61.7

34.6

Minor 5ss

28.8

-2.4

3.5

34.5

43.8

Minor BPS

48.4

-0.1

1.9

61.43

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002000

Chromosome:

PEDO01011189.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001996

21 - 2028

2008