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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011199.1_14115_14275_F


Intron Information:

Intron Rank:
29

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
14115 - 14275

Intron Length:
161

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGG|GTAGGTTGT

5'SS Class:
major

3'SS Sequence:
CCTCTCCCCACAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCATCAC

U12 Branch Point Sequence:
GCCGCCATCACC

Flanking Amino Acid:
VLAKLREDTAAPSAPEKMET

Intron Amino Acid Position:
1383

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.9
0.64
1.1
69.7
43.7

Major BPS
53.4
0.09
1.1
57.3
37.7

Major PPT
74.9
0.56
0.7
68.3
25.5

Minor 5ss
40.1
-1.1
3.2
49.2
47.1

Minor BPS
44.6
-0.4
2.1
51.51
45.6

Associated Gene:

Gene:
DNMT1

Ensembl Gene ID:

Chromosome:
PEDO01011199.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

714 - 14322
13609