About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011199.1_15934_16015_F


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
15934 - 16015

Intron Length:
82

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGAGTGTG

5'SS Class:
strong_major

3'SS Sequence:
TACCCTTCCCCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CGTTAAT

U12 Branch Point Sequence:
TCTCTGTTACCC

Flanking Amino Acid:
REEEDGRKVKIIRTFRIETR

Intron Amino Acid Position:
82

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
91.7
0.98
0.7
81.3
32.8

Major BPS
72
0.55
1.2
73.3
39.1

Major PPT
73.5
0.53
0.8
65.2
35.9

Minor 5ss
30.9
-2.2
3.2
39.6
46.4

Minor BPS
47.2
-0.2
2.3
62.68
43.2

Associated Gene:

Gene:
EIF3G

Ensembl Gene ID:

Chromosome:
PEDO01011199.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

15161 - 17392
2232