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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011199.1_1783_2001_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
1783 - 2001

Intron Length:
219

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAA|GTAACGGCT

5'SS Class:
major

3'SS Sequence:
CTCGTCCCAACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CGCTAAC

U12 Branch Point Sequence:
CTCGTCCCAACA

Flanking Amino Acid:
RRSRSNGESKRSPASSRVTR

Intron Amino Acid Position:
158

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
66.4
0.39
1.2
64.4
39.1

Major BPS
57.1
0.18
1.1
59
36

Major PPT
68
0.4
0.9
62.2
33.5

Minor 5ss
39.1
-1.2
3.7
56.6
42.2

Minor BPS
45.1
-0.3
1.9
55.29
43.9

Associated Gene:

Gene:
DNMT1

Ensembl Gene ID:

Chromosome:
PEDO01011199.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

714 - 14322
13609