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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011199.1_20259_20349_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20259 - 20349

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCGTGGG

5'SS Class:

major

3'SS Sequence:

CCGCCTCGCCTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

CTGAGCTGATTT

Flanking Amino Acid:

AQQSAVRLTEIGPRMTLQLV

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

63.3

43.1

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

57.5

0.17

0.9

49.6

34.1

Minor 5ss

25.6

-2.8

3.1

31.6

42.7

Minor BPS

42.3

-0.5

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000025323

Chromosome:

PEDO01011199.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038202

18191 - 21557

3367