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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011199.1_3244_3329_F


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
3244 - 3329

Intron Length:
86

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCC|GTAAGGAAT

5'SS Class:
major

3'SS Sequence:
TGTCTTCGCCCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTCCAAC

U12 Branch Point Sequence:
GCTCCTCCAACG

Flanking Amino Acid:
KFFQGDPDDALEEPEMLTDE

Intron Amino Acid Position:
264

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
66.5
0.39
1.3
69.9
42.1

Major BPS
49.8
-0
1.2
60
34.3

Major PPT
72.8
0.51
1
65.4
41.1

Minor 5ss
35.8
-1.6
3.3
53.2
44

Minor BPS
45.4
-0.4
1.9
50.74
43.1

Associated Gene:

Gene:
DNMT1

Ensembl Gene ID:

Chromosome:
PEDO01011199.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

714 - 14322
13609