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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011250.1_1545_2062_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1545 - 2062

Intron Length:

518

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCAGCAGCC

5'SS Class:

weak_major

3'SS Sequence:

CCCCAGGACGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCAGAC

U12 Branch Point Sequence:

TCCCCCAGGACG

Flanking Amino Acid:

GCAVPGSGQMGLNILLVGKT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.2

0.22

1.3

60.7

39.5

Major BPS

64.2

0.35

60.7

37.6

Major PPT

52.8

0.06

45.1

35.1

Minor 5ss

25.1

-2.9

4.3

33.2

42.3

Minor BPS

45.3

-0.5

1.8

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020864

Chromosome:

PEDO01011250.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030144

1450 - 2712

1263