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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011301.1_2050_2266_R

Intron Information:

Intron Rank:

146592

Intron Class:

major

Intron Phase:

Intron Coordinates:

2050 - 2266

Intron Length:

217

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TGTAACTCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATAAAC

U12 Branch Point Sequence:

ACTTGTGTAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

78.8

35.5

Major BPS

64.6

0.36

71.3

30.4

Major PPT

73.2

0.52

62.7

43.8

Minor 5ss

34.9

-1.7

3.2

42.4

44.3

Minor BPS

49.3

0.03

2.4

73.4

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026212

Chromosome:

PEDO01011301.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027718

1236 - 2539

1304

ENSAPLT00000018850

813 - 2539

1727

ENSAPLT00000018007

813 - 2539

1727

ENSAPLT00000043712

1548 - 2539

992