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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011342.1_2408_3345_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2408 - 3345

Intron Length:

938

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTGGGGGCG

5'SS Class:

major

3'SS Sequence:

CCCCTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CGTCCCTCACCC

Flanking Amino Acid:

EDFAMDEDGDESIHKLKEKA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.3

0.34

1.1

39.3

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

70.9

0.47

0.7

64.7

23.9

Minor 5ss

23.2

-3.1

3.5

29.5

43.4

Minor BPS

49.2

-0

1.9

61.01

43.9

Associated Gene:

Gene:

RBM8A

Ensembl Gene ID:

ENSAPLG00000001827

Chromosome:

PEDO01011342.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001820

2341 - 4539

2199