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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011342.1_3406_3539_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3406 - 3539

Intron Length:

134

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCACC

5'SS Class:

strong_major

3'SS Sequence:

TCCCTTTCCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATTAT

U12 Branch Point Sequence:

CGCTCCCCAATT

Flanking Amino Acid:

KKRKGRGFGSEEGSRARVRE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.5

0.84

0.9

74.9

35.3

Major BPS

64.6

0.36

1.1

55.7

39.9

Major PPT

79.3

0.66

0.7

72.1

32.5

Minor 5ss

35.2

-1.7

2.8

43.7

Minor BPS

48.8

-0

1.9

65.58

Associated Gene:

Gene:

RBM8A

Ensembl Gene ID:

ENSAPLG00000001827

Chromosome:

PEDO01011342.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001820

2341 - 4539

2199