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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011342.1_4003_4112_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4003 - 4112

Intron Length:

110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCGCC

5'SS Class:

major

3'SS Sequence:

GCTCTTCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

CCACCCTCAATT

Flanking Amino Acid:

NLDRRTGYLKGYTLVEYETY

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

68.2

38.6

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

75.1

0.56

0.8

69.2

31.4

Minor 5ss

36.2

-1.6

3.5

50.4

46.4

Minor BPS

55.9

0.26

1.6

66.5

44.3

Associated Gene:

Gene:

RBM8A

Ensembl Gene ID:

ENSAPLG00000001827

Chromosome:

PEDO01011342.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001820

2341 - 4539

2199