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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011342.1_5985_6222_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5985 - 6222

Intron Length:

238

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CCG|GCGGTGAGC

5'SS Class:

weak_major

3'SS Sequence:

TTCCTCCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

CTTTTTTTGGCT

Flanking Amino Acid:

AAISGRMKEAASSRDFQLRR

Intron Amino Acid Position:

246

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.05

1.3

54.1

40.2

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

78.5

0.64

0.7

73.3

24.9

Minor 5ss

-3.9

3.7

24.7

37.4

Minor BPS

-0.2

3.4

77.64

39.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031215

Chromosome:

PEDO01011342.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020074

5467 - 7128

1662

ENSAPLT00000030527

4033 - 10295

6263