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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011342.1_6425_6529_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6425 - 6529

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCGAG

5'SS Class:

major

3'SS Sequence:

ATCCTACCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

CCGATCCTACCC

Flanking Amino Acid:

GLSALLALPQAFVFHTVSRS

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.9

0.56

1.1

59.3

41.8

Major BPS

66.3

0.4

1.1

41.8

Major PPT

69.6

0.44

0.9

62.8

32.7

Minor 5ss

28.8

-2.4

3.5

36.3

48.1

Minor BPS

42.5

-0.5

1.9

46.54

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031215

Chromosome:

PEDO01011342.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030527

4033 - 10295

6263

ENSAPLT00000020074

5467 - 7128

1662

ENSAPLT00000030811

5467 - 11240

5774