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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011395.1_1303_1407_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

3UTR

Intron Coordinates:

1303 - 1407

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAATACA

5'SS Class:

strong_major

3'SS Sequence:

TCTTGCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAC

U12 Branch Point Sequence:

TACACTCGGATG

Flanking Amino Acid:

3UTR

Intron Amino Acid Position:

3UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

83.1

28.6

Major BPS

69.2

0.48

37.1

Major PPT

0.81

0.8

80.4

31.6

Minor 5ss

35.4

-1.7

2.7

43.5

43.6

Minor BPS

40.6

-0.8

1.7

41.19

37.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019574

Chromosome:

PEDO01011395.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036650

502 - 2629

2128