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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011406.1_67_149_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

67 - 149

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTT|GTGTGCTGG

5'SS Class:

weak_major

3'SS Sequence:

TCTTTGCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTACAT

U12 Branch Point Sequence:

TGCTTCTACATG

Flanking Amino Acid:

MRCRQPAFEPVTFVEVAV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.1

0.12

1.1

39.9

Major BPS

70.2

0.5

1.1

77.2

Major PPT

86.2

0.81

0.8

80.6

31.4

Minor 5ss

46.5

-0.4

2.8

60.5

45.6

Minor BPS

44.9

-0.5

2.1

50.64

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011532

Chromosome:

PEDO01011406.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011996

43 - 851

809