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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011409.1_486_598_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

486 - 598

Intron Length:

113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGAGCC

5'SS Class:

major

3'SS Sequence:

TGCCCCTGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCCAG

U12 Branch Point Sequence:

CTCCCAGGGACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

63.2

36.7

Major BPS

44.5

-0.3

1.6

55.8

41.7

Major PPT

65.4

0.35

38.6

Minor 5ss

24.9

-2.9

3.3

32.9

42.4

Minor BPS

39.1

-0.8

2.2

49.66

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020332

Chromosome:

PEDO01011409.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038708

222 - 1908

1687