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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011411.1_1460_2172_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1460 - 2172

Intron Length:

713

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCC

5'SS Class:

strong_major

3'SS Sequence:

CTCTGTCCCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTGAT

U12 Branch Point Sequence:

CGGTCCCCATCT

Flanking Amino Acid:

PDGRNVCKADSPPAGLACCP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

71.2

34.2

Major BPS

82.5

0.81

0.8

71.4

36.6

Major PPT

74.6

0.55

0.8

68.2

32.2

Minor 5ss

27.1

-2.6

3.2

41.6

Minor BPS

44.6

-0.3

2.1

61.78

47.4

Associated Gene:

Gene:

SCARF1

Ensembl Gene ID:

ENSAPLG00000022358

Chromosome:

PEDO01011411.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035563

1145 - 6866

5722