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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011411.1_2235_2459_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2235 - 2459

Intron Length:

225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

TGTGCCCCGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

TGTGCCCCGACA

Flanking Amino Acid:

WKQEGRECTAALCEGEDACG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

74.5

41.9

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

64.3

0.32

58.2

38.5

Minor 5ss

43.9

-0.7

3.2

62.5

43.1

Minor BPS

47.9

-0.1

64.64

41.4

Associated Gene:

Gene:

SCARF1

Ensembl Gene ID:

ENSAPLG00000022358

Chromosome:

PEDO01011411.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035563

1145 - 6866

5722