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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011411.1_3809_3882_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3809 - 3882

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGTGG

5'SS Class:

major

3'SS Sequence:

TTCTCTCTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GGGGCAT

U12 Branch Point Sequence:

CCTTTCTTCTCT

Flanking Amino Acid:

CLCQAGYWGPSCNDTCPEGY

Intron Amino Acid Position:

385

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.5

0.65

63.2

43.6

Major BPS

40.9

-0.5

1.6

42.8

49.4

Major PPT

88.3

0.86

0.7

80.7

31.3

Minor 5ss

36.2

-1.6

3.2

47.4

Minor BPS

42.2

-0.5

3.6

70.48

46.9

Associated Gene:

Gene:

SCARF1

Ensembl Gene ID:

ENSAPLG00000022358

Chromosome:

PEDO01011411.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035563

1145 - 6866

5722