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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011411.1_3987_4106_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3987 - 4106

Intron Length:

120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGA|GTAAGAGCA

5'SS Class:

major

3'SS Sequence:

TTTCCCCGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

ACACCCTGATCC

Flanking Amino Acid:

CHPVRGDCALSLDPGALAAA

Intron Amino Acid Position:

420

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.8

0.49

1.1

62.5

36.5

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

78.7

0.65

0.9

73.5

31.4

Minor 5ss

-2.1

3.3

36.3

41.4

Minor BPS

48.5

-0.1

1.7

56.45

41.4

Associated Gene:

Gene:

SCARF1

Ensembl Gene ID:

ENSAPLG00000022358

Chromosome:

PEDO01011411.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035563

1145 - 6866

5722