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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011411.1_4652_4895_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4652 - 4895

Intron Length:

244

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGACCCAC

5'SS Class:

major

3'SS Sequence:

CCTTTTCCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

GAGCCCTGACGC

Flanking Amino Acid:

GPEYSVPPREGVPLLGGAEL

Intron Amino Acid Position:

544

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.47

1.2

59.3

41.8

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

82.3

0.73

0.7

80.6

24.7

Minor 5ss

38.3

-1.3

3.1

50.1

46.5

Minor BPS

42.4

-0.6

1.9

46.82

41.7

Associated Gene:

Gene:

SCARF1

Ensembl Gene ID:

ENSAPLG00000022358

Chromosome:

PEDO01011411.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035563

1145 - 6866

5722