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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011463.1_1762_2201_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1762 - 2201

Intron Length:

440

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCCCAA

5'SS Class:

major

3'SS Sequence:

GGGGTCCCCCCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTGAT

U12 Branch Point Sequence:

CGTCCCTGATTT

Flanking Amino Acid:

IAERSWNYGQFDAGVLEACL

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.1

0.36

1.3

56.2

44.7

Major BPS

66.4

0.41

1.1

56.9

40.5

Major PPT

58.7

0.2

47.3

41.6

Minor 5ss

41.7

-0.9

3.2

56.2

Minor BPS

49.7

0.06

1.8

67.22

43.5

Associated Gene:

Gene:

TGM1

Ensembl Gene ID:

ENSAPLG00000017251

Chromosome:

PEDO01011463.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041486

48 - 4536

4489