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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011463.1_185_820_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

185 - 820

Intron Length:

636

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTACTGGGC

5'SS Class:

weak_major

3'SS Sequence:

CTGGTGGGCGCAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTGAC

U12 Branch Point Sequence:

TGGTTCTGACTG

Flanking Amino Acid:

CWVFAGVMTTVLRCLGLPTR

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.7

0.21

1.2

47.8

42.6

Major BPS

81.4

0.78

0.9

71.3

36.7

Major PPT

55.9

0.13

1.1

49.1

43.8

Minor 5ss

-2.4

3.7

40.8

45.8

Minor BPS

47.5

-0.3

1.8

52.17

42.9

Associated Gene:

Gene:

TGM1

Ensembl Gene ID:

ENSAPLG00000017251

Chromosome:

PEDO01011463.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041486

48 - 4536

4489