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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011463.1_996_1653_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

996 - 1653

Intron Length:

658

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGGGTTTT

5'SS Class:

major

3'SS Sequence:

TGGGGTGCCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTGTGAG

U12 Branch Point Sequence:

CCGTCTGTGAGG

Flanking Amino Acid:

VMVSRVVSAMVNSLDDNGVL

Intron Amino Acid Position:

276

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

76.6

34.9

Major BPS

-0.1

1.6

46.5

Major PPT

58.2

0.19

1.1

50.1

43.9

Minor 5ss

39.4

-1.2

3.3

54.1

45.6

Minor BPS

40.9

-0.8

2.2

40.81

44.7

Associated Gene:

Gene:

TGM1

Ensembl Gene ID:

ENSAPLG00000017251

Chromosome:

PEDO01011463.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041486

48 - 4536

4489