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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011465.1_193_790_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

193 - 790

Intron Length:

598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

CCCCCCCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTTAC

U12 Branch Point Sequence:

CTGGTTTTACCC

Flanking Amino Acid:

KLANECLFILEFVMIVVFGM

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

71.3

32.5

Major BPS

68.8

0.47

1.2

63.4

Major PPT

72.2

0.5

0.7

64.9

23.7

Minor 5ss

30.9

-2.2

3.4

38.5

41.1

Minor BPS

48.6

-0.1

1.7

56.36

43.3

Associated Gene:

Gene:

KCNQ4

Ensembl Gene ID:

ENSAPLG00000002396

Chromosome:

PEDO01011465.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024640

52 - 6852

6801

ENSAPLT00000002405

53 - 6852

6800

ENSAPLT00000032736

60 - 7316

7257