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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011465.1_20763_21181_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20763 - 21181

Intron Length:

419

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTGCATGGC

5'SS Class:

weak_major

3'SS Sequence:

TTTCATCCAGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTTCAT

U12 Branch Point Sequence:

GTTTCATCCAGC

Flanking Amino Acid:

LGELGELGTPWKNLFQQFDR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.4

0.03

1.1

45.1

37.4

Major BPS

82.2

0.8

1.1

85.7

34.9

Major PPT

75.5

0.57

0.9

71.3

Minor 5ss

28.1

-2.5

3.4

38.6

41.2

Minor BPS

43.4

-0.5

2.4

60.67

44.1

Associated Gene:

Gene:

PEF1

Ensembl Gene ID:

ENSAPLG00000009335

Chromosome:

PEDO01011465.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009713

19999 - 21387

1389