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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011465.1_6233_6392_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6233 - 6392

Intron Length:

160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGCTGG

5'SS Class:

major

3'SS Sequence:

CCCCTGGGGACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

CCATCCCTCACG

Flanking Amino Acid:

MLGRIKSLQTRVDQIVGRGG

Intron Amino Acid Position:

438

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

44.6

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

52.5

0.06

1.1

47.4

39.3

Minor 5ss

38.3

-1.3

47.3

48.1

Minor BPS

-0.3

2.2

52.53

47.7

Associated Gene:

Gene:

KCNQ4

Ensembl Gene ID:

ENSAPLG00000002396

Chromosome:

PEDO01011465.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024640

52 - 6852

6801

ENSAPLT00000002405

53 - 6852

6800