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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011465.1_6529_6633_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6529 - 6633

Intron Length:

105

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

TGCCCGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAG

U12 Branch Point Sequence:

GTCCGCTGAGCG

Flanking Amino Acid:

MGRVAKVERQVQSIEHKLDV

Intron Amino Acid Position:

484

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

-0.2

1.6

40.4

42.3

Major PPT

65.1

0.34

0.9

57.6

33.2

Minor 5ss

26.2

-2.7

2.9

30.6

42.9

Minor BPS

42.2

-0.7

2.1

46.65

45.6

Associated Gene:

Gene:

KCNQ4

Ensembl Gene ID:

ENSAPLG00000002396

Chromosome:

PEDO01011465.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024640

52 - 6852

6801

ENSAPLT00000002405

53 - 6852

6800