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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011506.1_6466_6611_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
6466 - 6611

Intron Length:
146

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGG|GTAACGCAG

5'SS Class:
major

3'SS Sequence:
CTCTGTCCCACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCCCGAC

U12 Branch Point Sequence:
CTGCCCCGACCC

Flanking Amino Acid:
AENQEGVTHIGRVYKEHLGL

Intron Amino Acid Position:
80

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
64.1
0.33
1.3
51.4
47

Major BPS
43.6
-0.4
1.2
35.4
32.1

Major PPT
74.6
0.55
0.8
68.2
32.2

Minor 5ss
35.2
-1.7
3.3
38.7
46.5

Minor BPS
43.1
-0.5
2
53.41
43.8

Associated Gene:

Gene:
EIF4E1B

Ensembl Gene ID:

Chromosome:
PEDO01011506.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

6351 - 6963
613