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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011554.1_877_1054_F

Intron Information:

Intron Rank:

129576

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

877 - 1054

Intron Length:

178

Sequence Information:

Terminal Dinucleotides:

GT-TG

5'SS Sequence:

GTG|GTGGCCTTC

5'SS Class:

weak_major

3'SS Sequence:

ATGGGTGCTGCTG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGGTCAA

U12 Branch Point Sequence:

CTCCCCATGACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.3

0.13

1.2

52.8

41.3

Major BPS

60.5

0.26

1.3

63.4

44.3

Major PPT

37.6

-0.7

3.1

47.1

45.4

Minor 5ss

47.3

-0.3

3.1

63.7

43.5

Minor BPS

54.7

0.13

1.7

64.4

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019731

Chromosome:

PEDO01011554.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017775

196 - 1398

1203