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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011558.1_7361_7871_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7361 - 7871

Intron Length:

511

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CGG|GCTGGCCAA

5'SS Class:

weak_major

3'SS Sequence:

AGGCGTCTCGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTCCAG

U12 Branch Point Sequence:

TCCTCCTCCAGT

Flanking Amino Acid:

VTVLLFPVMYGAEVH

Intron Amino Acid Position:

332

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.2

0.17

1.4

42.8

44.1

Major BPS

41.5

-0.5

1.6

49.7

Major PPT

46.2

-0.2

1.7

46.5

40.9

Minor 5ss

21.4

-3.3

3.8

37.4

Minor BPS

47.4

-0.1

2.3

67.41

49.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000009036

Chromosome:

PEDO01011558.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020123

1745 - 7884

6140