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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011564.1_515_3679_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

515 - 3679

Intron Length:

3165

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGCGAA

5'SS Class:

strong_major

3'SS Sequence:

TTTATCTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TGTTCTTTATCT

Flanking Amino Acid:

DAVAVTMGPKGRTVIIEQSW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.5

0.93

0.9

77.6

32.8

Major BPS

81.6

0.78

0.8

24.9

Major PPT

77.3

0.61

0.8

70.4

36.2

Minor 5ss

35.6

-1.6

3.3

46.2

49.1

Minor BPS

74.4

0.84

1.5

88.63

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027317

Chromosome:

PEDO01011564.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045212

341 - 5144

4804