Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011568.1_1660_2637_F

Intron Information:

Intron Rank:

150934

Intron Class:

major

Intron Phase:

Intron Coordinates:

1660 - 2637

Intron Length:

978

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTACGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTGCCCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTGAT

U12 Branch Point Sequence:

ACCGGGTTGATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

38.1

Major BPS

63.5

0.33

1.4

57.1

49.4

Major PPT

68.6

0.42

0.8

61.9

28.8

Minor 5ss

40.2

-1.1

3.1

51.4

45.2

Minor BPS

38.6

-0.9

2.3

42.39

39.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031105

Chromosome:

PEDO01011568.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033541

21 - 2935

2915