Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011568.1_476_1436_F

Intron Information:

Intron Rank:

150935

Intron Class:

major

Intron Phase:

Intron Coordinates:

476 - 1436

Intron Length:

961

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGCACA

5'SS Class:

major

3'SS Sequence:

ATTTCTTAACCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

CATTTCTTAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

67.6

39.4

Major BPS

82.2

0.8

71.9

35.8

Major PPT

73.6

0.53

67.8

42.1

Minor 5ss

32.8

-2

3.1

40.2

45.7

Minor BPS

0.89

1.1

79.05

36.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000031105

Chromosome:

PEDO01011568.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033541

21 - 2935

2915