Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011589.1_146064_148036_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

146064 - 148036

Intron Length:

1973

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCTGTACC

5'SS Class:

major

3'SS Sequence:

TCGCTCCGTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTACCAC

U12 Branch Point Sequence:

GTTACCACAACC

Flanking Amino Acid:

NRSVTSRYIASRAVQRSLAI

Intron Amino Acid Position:

771

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.3

71.5

38.6

Major BPS

55.7

0.14

1.3

66.8

39.4

Major PPT

67.8

0.4

0.9

65.9

35.9

Minor 5ss

38.5

-1.3

2.4

41.3

Minor BPS

0.11

1.9

70.01

40.5

Associated Gene:

Gene:

ZC3H3

Ensembl Gene ID:

ENSAPLG00000021603

Chromosome:

PEDO01011589.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036966

113886 - 226503

112618