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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011589.1_251963_252068_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

251963 - 252068

Intron Length:

106

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAAGAGCC

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTCAG

U12 Branch Point Sequence:

TTCGTCTCAGCC

Flanking Amino Acid:

KNLMFDAQKSVIEQLELSFP

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

67.3

36.7

Major BPS

53.2

0.08

1.7

65.3

43.7

Major PPT

87.2

0.84

0.7

81.4

30.6

Minor 5ss

32.2

-2

3.4

43.3

Minor BPS

48.4

-0.1

1.9

61.77

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008916

Chromosome:

PEDO01011589.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009365

246035 - 262986

16952