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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011589.1_253001_253082_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

253001 - 253082

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TCCACCCCCCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTCCAC

U12 Branch Point Sequence:

GAGCCCTGACCT

Flanking Amino Acid:

AADPSFQLDEFLTYLFSKEN

Intron Amino Acid Position:

297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

67.2

38.1

Major BPS

55.1

0.13

1.3

67.8

38.2

Major PPT

67.7

0.4

0.8

57.9

33.1

Minor 5ss

26.2

-2.7

3.2

34.3

Minor BPS

49.2

0.02

1.8

64.79

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008916

Chromosome:

PEDO01011589.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009365

246035 - 262986

16952