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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011589.1_260805_260964_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

260805 - 260964

Intron Length:

160

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

CTCACCCCCGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

CTGTCCTCACCC

Flanking Amino Acid:

DNSKNKTDVVADNGFNPVWL

Intron Amino Acid Position:

1134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

72.4

0.56

73.5

32.5

Major PPT

64.5

0.33

0.8

58.3

26.6

Minor 5ss

29.9

-2.3

3.4

45.6

Minor BPS

54.9

0.13

1.9

66.22

45.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008916

Chromosome:

PEDO01011589.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009365

246035 - 262986

16952