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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01011589.1_268364_268760_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

268364 - 268760

Intron Length:

397

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTTCT

5'SS Class:

major

3'SS Sequence:

GCTTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTAAA

U12 Branch Point Sequence:

GGAAGCTAAAAG

Flanking Amino Acid:

RGSDLNLVEDSEREALLHAP

Intron Amino Acid Position:

417

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.8

0.66

75.5

Major BPS

61.3

0.28

1.1

61.7

34.1

Major PPT

82.9

0.74

0.8

76.8

31.8

Minor 5ss

-0.5

2.8

65.4

39.4

Minor BPS

40.2

-0.8

2.1

40.1

42.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008882

Chromosome:

PEDO01011589.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009233

264876 - 274158

9283